Selected publications

• Brejová, B., Boršová, K., Hodorová, V., Čabanová, V., Gafurov, A., Fričová, D., Neboháčová, M., Vinař, T., Klempa, B. and Nosek, J., 2021. Nanopore sequencing of SARS-CoV-2: Comparison of short and long PCR-tiling amplicon protocols. PLoS One , 16 (10), p.e0259277.
• Gafurov, A., Vinař, T., Medvedev, P., Brejová, B. (2024). Efficient Analysis of Annotation Colocalization Accounting for Genomic Contexts. In: Ma, J. (eds) Research in Computational Molecular Biology. RECOMB 2024. Lecture Notes in Computer Science, vol 14758. Springer, Cham.
• Gafurov, A., Vinař, T., & Brejová, B. (2021, July). Probabilistic Models of k-mer Frequencies. In Conference on Computability in Europe (pp. 227-236). Springer, Cham.
• Gafurov, A., Baláž, A., Amman, F., Boršová, K., Čabanová, V., Klempa, B., Bergthaler, A., Vinař, T. and Brejová, B., 2022. VirPool: model-based estimation of SARS-CoV-2 variant proportions in wastewater samples. BMC bioinformatics , 23 (1), p.551.
• Gafurov, A., Brejová, B. and Medvedev, P., 2022. Markov chains improve the significance computation of overlapping genome annotations. Bioinformatics , 38 (Supplement_1), pp.i203-i211.

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